Fixed Update for Device Monitor

CircleFit/plotting.py

@@ -7,7 +7,10 @@ plotting_utilities_module_version = '1.0.1'
 import numpy as np
 import pandas as pd
 from IPython.display import display, Markdown
-import matplotlib.pyplot as plt
+try:
+    import matplotlib.pyplot as plt
+except NotImplementedError:
+    pass
 from bokeh.plotting import figure, show, gridplot, ColumnDataSource
 from bokeh.models import HoverTool
 from collections import OrderedDict

DataModule/data_IQ.py

@@ -7,8 +7,11 @@ import numpy as np
 import bokeh.plotting as bp
 from bokeh.layouts import row, column
 from bokeh.models import Spacer
-from matplotlib.pyplot import get_cmap
-from matplotlib.colors import rgb2hex
+try:
+    from matplotlib.pyplot import get_cmap
+    from matplotlib.colors import rgb2hex
+except NotImplementedError:
+    pass
 from bokeh.models import LinearColorMapper, LogColorMapper, BasicTicker
 from bokeh.models import ColorBar
 from .fit_functions import gaussian_2d_mult

DataModule/data_grid.py

@@ -11,7 +11,10 @@ import holoviews as hv
 import holoviews.operation.datashader as hd
 import scipy.signal as sp_sig
 import scipy.interpolate as sp_intp
-import matplotlib.pyplot as plt
+try:
+    import matplotlib.pyplot as plt
+except NotImplementedError:
+    pass
 import numpy as np
 import xarray as xr
 from .data_table import data_table

DataModule/data_table.py

@@ -12,7 +12,10 @@ from .plot_style import color_scheme, cc, check_color, color_labels
 import holoviews as hv
 import holoviews.operation.datashader as hd
 import numpy as np
-import matplotlib.pyplot as plt
+try:
+    import matplotlib.pyplot as plt
+except NotImplementedError:
+    pass
 import bokeh.plotting as bp
 from bokeh.models import HoverTool
 import scipy.optimize as sp_opt

DataModule/downwards_compatibility/data_surface.py

@@ -6,7 +6,10 @@
 """
 from DataModule.base import data_module_base
 import numpy as np
-import matplotlib.pyplot as plt
+try:
+    import matplotlib.pyplot as plt
+except NotImplementedError:
+    pass
 import scipy.signal as sp_sig
 import scipy.interpolate as sp_intp
 from DataModule.fit_functions import mode_fit, lorentzian_fit
@@ -640,7 +643,7 @@ class data_surface(data_module_base):
 # Needs rethinking ############################################################
 
     # Do we need this function?
-    def contourf(self, colormap=plt.cm.hsv, lev=10, norm=0, **args):
+    def contourf(self, colormap=None, lev=10, norm=0, **args):
         '''contourf is a 2D plot with the color for the depth,
 
         ToDo
@@ -661,6 +664,8 @@ class data_surface(data_module_base):
         
         NOTE: default interpolation is on
         '''
+        if colormap is None:
+            colormap = plt.cm.hsv
         zsel = self.return_zsel()
         if norm is 0:
             normal = plt.cm.colors.Normalize(vmax=np.abs(zsel).max(),

DataModule/functions.py

@@ -19,8 +19,11 @@ from .data_complex import data_complex
 from .data_grid import data_grid
 from .data_table import data_table
 from .data_IQ import data_IQ
-import matplotlib.pyplot as plt
-import matplotlib
+try:
+    import matplotlib.pyplot as plt
+    import matplotlib
+except NotImplementedError:
+    pass
 from .version import __version__
 import bokeh.plotting as bp
 from .plot_style import color_scheme

DataModule/plot_style.py

 #!/usr/bin/python
 """This file contains a normalized plot style for our group."""
 
-import matplotlib.pyplot as plt
+# Try to import matplotlib
+try:
+    import matplotlib.pyplot as plt
+except NotImplementedError:
+    pass
 import builtins
 import re